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Gene fusion involving the insulin-like growth factor 1 receptor in an ALK-negative inflammatory myofibroblastic tumour

Inflammatory myofibroblastic tumour (IMT) is a soft tissue tumour primarily affecting children and young adults. Approximately 50% of IMTs have gene fusions involving the receptor tyrosine kinase (RTK)-encoding ALK gene, providing a molecular rationale for treating IMT patients with unresectable tumours with tyrosine kinase inhibitors (TKI). However, a subset of IMT instead displays fusions affect

Chemical Abundances of Main-sequence, Turnoff, Subgiant, and Red Giant Stars from APOGEE Spectra. II. Atomic Diffusion in M67 Stars

Chemical abundances for 15 elements (C, N, O, Na, Mg, Al, Si, K, Ca, Ti, V, Cr, Mn, Fe, and Ni) are presented for 83 stellar members of the 4 Gyr old solar-metallicity open cluster M67. The sample contains stars spanning a wide range of evolutionary phases, from G dwarfs to red clump stars. The abundances were derived from near-IR (λ1.5-1.7 μm) high-resolution spectra (R ,F= ,F22,500) from the SD

Infrared Degenerate Four-wave Mixing with Upconversion Detection for Quantitative Gas Sensing

We present a protocol for performing gas spectroscopy using infrared degenerated four-wave mixing (IR-DFWM), for the quantitative detection of gas species in the ppm-to-single-percent range. The main purpose of the method is the spatially resolved detection of low-concentration species, which have no transitions in the visible or near-IR spectral range that could be used for detection. IR-DFWM is

Chemical Cartography with APOGEE : Multi-element Abundance Ratios

We map the trends of elemental abundance ratios across the Galactic disk, spanning R = 3-15 kpc and midplane distance |Z| = 0-2 kpc, for 15 elements in a sample of 20,485 stars measured by the SDSS/APOGEE survey (O, Na, Mg, Al, Si, P, S, K, Ca, V, Cr, Mn, Fe, Co, Ni). Adopting Mg rather than Fe as our reference element, and separating stars into two populations based on [Fe/Mg], we find that the m

Identification of targetable lesions in anaplastic thyroid cancer by genome profiling

Anaplastic thyroid cancer (ATC) is a rare and extremely malignant tumor with no available cure. The genetic landscape of this malignancy has not yet been fully explored. In this study, we performed whole exome sequencing and the RNA-sequencing of fourteen cases of ATC to delineate copy number changes, fusion gene events, and somatic mutations. A high frequency of genomic amplifications was seen, i

Sverige kan leda en revolution i jordbruket

Sverige kan bli ledande i en radikal omställning av framtidens matproduktion. Genom forskning och utveckling av perenna livsmedelsgrödor kan vi aktivt främja en perenn revolution i jordbruket. Perenna grödor återkommer år efter år utan att behöva sås på nytt, skriver en rad forskare.

Sequencing and phylogenetic analysis of chloroplast genes in freshwater raphidophytes

The complex evolution of chloroplasts in microalgae has resulted in highly diverse pigment profiles. Freshwater raphidophytes, for example, display a very different pigment composition to marine raphidophytes. To investigate potential differences in the evolutionary origin of chloroplasts in these two groups of raphidophytes, the plastid genomes of the freshwater species Gonyostomum semen and Vacu

Direct numerical simulation of turbulent premixed flames at high Karlovitz numbers: structure and modelling

There has been recent increased interest in premixed flames and in particular for use in gas turbines for power generation. This is a development that follows from increasing demands for high efficiency and low emissions of NOx, which can be achieved by using premixed flames and lean pre-heated mixtures, often close to the lean flammability limit. In combination with high levels of turbulence, whi

An UPLC-MS/MS assay to measure glutathione as marker for oxidative stress in cultured cells

Oxidative stress plays a role in the onset and progression of a number of diseases, such as Alzheimer’s disease, diabetes and cancer, as well as ageing. Oxidative stress is caused by an increased production of reactive oxygen species and reduced antioxidant activity, resulting in the oxidation of glutathione. The ratio of reduced to oxidised glutathione is often used as a marker of the redox state

Observational hertzsprung-russell diagrams

Context. Gaia Data Release 2 provides high-precision astrometry and three-band photometry for about 1.3 billion sources over the full sky. The precision, accuracy, and homogeneity of both astrometry and photometry are unprecedented. Aims. We highlight the power of the Gaia DR2 in studying many fine structures of the Hertzsprung-Russell diagram (HRD). Gaia allows us to present many different HRDs,

The carbon balance of a managed boreal landscape measured from a tall tower in northern Sweden

Boreal forests exchange large amounts of carbon dioxide (CO2) with the atmosphere. A managed boreal landscape usually comprises various potential CO2 sinks and sources across forest stands of varying age classes, clear-cut areas, mires, and lakes. Due to this heterogeneity and complexity, large uncertainties exist regarding the net CO2 balance at the landscape scale. In this study, we present the

Search for long-lived particles produced in pp collisions at s =13 TeV that decay into displaced hadronic jets in the ATLAS muon spectrometer

A search for the decay of neutral, weakly interacting, long-lived particles using data collected by the ATLAS detector at the LHC is presented. The analysis in this paper uses 36.1 fb-1 of proton-proton collision data at s=13 TeV recorded in 2015-2016. The search employs techniques for reconstructing vertices of long-lived particles decaying into jets in the muon spectrometer exploiting a two-vert