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Activation functions play a central role in deep learning since they form an essential building stone of neural networks. In the last few years, the focus has been shifting towards investigating new types of activations that outperform the classical Rectified Linear Unit (ReLU) in modern neural architectures. Most recently, rational activation functions (RAFs) have awakened interest because they w
Many hand-held or mixed reality devices are used with a single sensor for 3D reconstruction, although they often comprise multiple sensors. Multi-sensor depth fusion is able to substantially improve the robustness and accuracy of 3D reconstruction methods, but existing techniques are not robust enough to handle sensors which operate with diverse value ranges as well as noise and outlier statistics
Background: Genetic variants within nearly 1000 loci are known to contribute to modulation of blood lipid levels. However, the biological pathways underlying these associations are frequently unknown, limiting understanding of these findings and hindering downstream translational efforts such as drug target discovery. Results: To expand our understanding of the underlying biological pathways and m
The application of multiple omics technologies in biomedical cohorts has the potential to reveal patient-level disease characteristics and individualized response to treatment. However, the scale and heterogeneous nature of multi-modal data makes integration and inference a non-trivial task. We developed a deep-learning-based framework, multi-omics variational autoencoders (MOVE), to integrate suc
There exist several datasets for developing self-driving car methodologies. Manually collected datasets impose inherent limitations on the variability of test cases and it is particularly difficult to acquire challenging scenarios, e.g. ones involving collisions with pedestrians. A way to alleviate this is to consider automatic generation of safety-critical scenarios for autonomous vehicle (AV) te
Intrinsically disordered proteins (IDPs) have a broad energy landscape and consequently sample many different conformations in solution. The innate flexibility of IDPs is exploited in their biological function, and in many instances allows a single IDP to regulate a range of processes in vivo. Due to their highly flexible nature, characterizing the structural properties of IDPs is not straightforw
The phase gradient autofocus (PGA) is a robust autofocusing approach that can efficiently refocus defocused synthetic aperture radar (SAR) imagery produced by frequency-domain algorithms. However, from a conventional viewpoint, PGA cannot be extended to refocus SAR imagery produced by time-domain algorithms, such as the filtered backprojection (FBP), as the spectrum of the FBP imagery is range amb
The synthesis of model and observational information using data assimilation can improve our understanding of the terrestrial carbon cycle, a key component of the Earth's climate-carbon system. Here we provide a data assimilation framework for combining observations of solar-induced chlorophyll fluorescence (SIF) and a process-based model to improve estimates of terrestrial carbon uptake or gross
The Fourier slice theorem for the standard Radon transform generalizes to a Laplace counterpart when considering the exponential Radon transform. We show how to use this fact in combination with algorithms for the unequally spaced fast Laplace transform to construct fast and accurate methods for computing both the forward exponential Radon transform and the corresponding back-projection operator.
In this paper, we describe a new system to extract, index, search, and visualize entities in Wikipedia. To carry out the entity extraction, we designed a high-performance, multilingual, entity linker and we used a document model to store the resulting linguistic annotations. The entity linker, HEDWIG, extracts the mentions from text usinga string matching Engine and links them toentities with a co
This paper considers the problem of finding a low rank matrix from observations of linear combinations of its elements. It is well known that if the problem fulfills a restricted isometry property (RIP), convex relaxations using the nuclear norm typically work well and come with theoretical performance guarantees. On the other hand these formulations suffer from a shrinking bias that can severely
Understanding communication and signalling has long been strived for in studies of animal behaviour. Many songbirds have a variable and complex song, closely connected to territory defence and reproductive success. However, the quantification of such variable song is challenging. In this paper, we present a novel, automated method for detection and classification of syllables in birdsong. The meth
The springtime transition to regional-scale onset of photosynthesis and net ecosystem carbon uptake in boreal and tundra ecosystems are linked to the soil freeze-thaw state. We present evidence from diagnostic and inversion models constrained by satellite fluorescence and airborne CO2 from 2012 to 2014 indicating the timing and magnitude of spring carbon uptake in Alaska correlates with landscape
Social interaction sensing and indoor positioning using are widely researched. However, many use cases only need to determine proximity, and not the exact location. In this paper, we describe two methods to determine which meeting each user is participating in using proximity data collected from a challenging real-world office.We show that the RSSI threshold approach to detecting proximity is not
The CO2 efflux from soil (soil respiration (SR)) is one of the largest fluxes in the global carbon (C) cycle and its response to climate change could strongly influence future atmospheric CO2 concentrations. Still, a large divergence of global SR estimates and its autotrophic (AR) and heterotrophic (HR) components exists among process based terrestrial ecosystem models. Therefore, alternatively de
Atmospheric inversions are used to derive constraints on the net sources and sinks of CO2 and other stable atmospheric tracers from their observed concentrations. The resolution and accuracy that the fluxes can be estimated with depends, among other factors, on the quality and density of the observational coverage, on the precision and accuracy of the transport model used by the inversion to relat
This is a comment on the review by Korolev and Leisner (2020, hereafter KL2020). The only two laboratory/field studies ever to measure the breakup in ice-ice collisions for in-cloud conditions were negatively criticised by KL2020, as were our subsequent theoretical and modelling studies informed by both studies. First, hypothetically, even without any further laboratory experiments, such theoretic
This study evaluates the applicability of scaled reassigned spectrograms (ReSTS) on ultrasound radio frequency data obtained with a clinical linear array ultrasound transducer. The ReSTS's ability to resolve axially closely spaced objects in a phantom is compared to the classical cross-correlation method with respect to the ability to resolve closely spaced objects as individual reflectors using u
Background: Radical prostatectomy reduces mortality among patients with localised prostate cancer. Evidence on whether different surgical techniques can affect mortality rates is lacking. Objective: To evaluate functional and oncological outcomes 8 yr after robot-assisted laparoscopic prostatectomy (RALP) and open retropubic radical prostatectomy (RRP). Design, setting, and participants: We enroll
